| Server IP : 82.208.35.60 / Your IP : 216.73.216.89 Web Server : Apache/2.4.55 (FreeBSD) OpenSSL/1.1.1q-freebsd PHP/7.3.31 System : FreeBSD server7.d2m.cz 12.4-RELEASE-p9 FreeBSD 12.4-RELEASE-p9 GENERIC amd64 User : studiokobylisy_cz ( 1008) PHP Version : 7.3.31 Disable Function : NONE MySQL : OFF | cURL : ON | WGET : OFF | Perl : OFF | Python : OFF | Sudo : OFF | Pkexec : OFF Directory : /usr/ports/biology/vt/ |
Upload File : |
PORTNAME= vt
DISTVERSION= 0.57721
PORTREVISION= 2
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
COMMENT= Discovers short variants from Next Generation Sequencing data
WWW= https://genome.sph.umich.edu/wiki/Vt
LICENSE= MIT
LIB_DEPENDS= libhts.so:biology/htslib \
libsvm.so:science/libsvm \
libdeflate.so:archivers/libdeflate \
libcurl.so:ftp/curl
USES= compiler:c++0x gmake ssl
USE_GITHUB= yes
GH_ACCOUNT= atks
PLIST_FILES= bin/vt
do-install:
${INSTALL_PROGRAM} ${WRKSRC}/vt ${STAGEDIR}${PREFIX}/bin
.include <bsd.port.mk>