| Server IP : 82.208.35.60 / Your IP : 216.73.216.89 Web Server : Apache/2.4.55 (FreeBSD) OpenSSL/1.1.1q-freebsd PHP/7.3.31 System : FreeBSD server7.d2m.cz 12.4-RELEASE-p9 FreeBSD 12.4-RELEASE-p9 GENERIC amd64 User : studiokobylisy_cz ( 1008) PHP Version : 7.3.31 Disable Function : NONE MySQL : OFF | cURL : ON | WGET : OFF | Perl : OFF | Python : OFF | Sudo : OFF | Pkexec : OFF Directory : /usr/ports/biology/trimmomatic/ |
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PORTNAME= trimmomatic
DISTVERSION= 0.39
CATEGORIES= biology java
MASTER_SITES= http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/
DISTNAME= Trimmomatic-${PORTVERSION}
MAINTAINER= jwb@FreeBSD.org
COMMENT= Flexible read trimming tool for Illumina NGS data
WWW= http://www.usadellab.org/cms/?page=trimmomatic
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/LICENSE
USES= zip
USE_JAVA= yes
JAVA_RUN= yes
NO_BUILD= yes
NO_ARCH= yes
SUB_FILES= trimmomatic
do-install:
${INSTALL_DATA} ${WRKSRC}/trimmomatic-${PORTVERSION}.jar \
${STAGEDIR}${JAVAJARDIR}/trimmomatic.jar
cd ${WRKSRC} && ${COPYTREE_SHARE} adapters ${STAGEDIR}${DATADIR}
${INSTALL_SCRIPT} ${WRKDIR}/trimmomatic ${STAGEDIR}${PREFIX}/bin
.include <bsd.port.mk>