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--- samtools-0.1.18/Makefile.orig 2018-03-06 16:29:49 UTC +++ samtools-0.1.18/Makefile @@ -1,5 +1,5 @@ -CC= gcc -CFLAGS= -g -Wall -fsigned-char -O2 #-m64 #-arch ppc +CC?= gcc +CFLAGS?= -g -Wall -fsigned-char -O2 #-m64 #-arch ppc DFLAGS= -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_CURSES_LIB=0 #-D_USE_KNETFILE KNETFILE_O= knetfile.o LOBJS= bgzf.o kstring.o bam_aux.o bam.o bam_import.o sam.o bam_index.o \