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--- Makefile.orig 2020-01-26 03:31:12 UTC
+++ Makefile
@@ -20,7 +20,7 @@ ifeq "$(GCCVER8)" "1"
BASEFLAGS += -Wno-class-memaccess
endif
-LINKER := $(if $(LINKER),$(LINKER),g++)
+LINKER := $(if $(LINKER),$(LINKER),$(CXX))
LDFLAGS := $(if $(LDFLAGS),$(LDFLAGS),-g)
@@ -151,7 +151,7 @@ rlink.o : rlink.h tablemaker.h $(GDIR)/G
tmerge.o : rlink.h tmerge.h
tablemaker.o : tablemaker.h rlink.h
${BAM}/libbam.a:
- cd ${BAM} && make lib
+ cd ${BAM} && ${MAKE} lib
stringtie: ${BAM}/libbam.a $(OBJS) stringtie.o
${LINKER} ${LDFLAGS} -o $@ ${filter-out %.a %.so, $^} ${LIBS}
@echo
@@ -167,6 +167,6 @@ clean:
${RM} stringtie${EXE} stringtie.o* $(OBJS)
${RM} core.*
allclean cleanAll cleanall:
- cd ${BAM} && make clean
+ cd ${BAM} && ${MAKE} clean
${RM} stringtie${EXE} stringtie.o* $(OBJS)
${RM} core.*