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--- src/kseq.h.orig 2019-11-04 16:28:52 UTC +++ src/kseq.h @@ -32,6 +32,9 @@ #include <string.h> #include <stdlib.h> +// Prevent redefinition of kstring_t below +#include <htslib/kstring.h> + #define KS_SEP_SPACE 0 // isspace(): \t, \n, \v, \f, \r #define KS_SEP_TAB 1 // isspace() && !' ' #define KS_SEP_LINE 2 // line separator: "\n" (Unix) or "\r\n" (Windows)